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RStudio pheatmap r package
Pheatmap R Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pheatmap+r+package/pheatmap+package/pmc12274721-74-0-6
Average 90 stars, based on 1 article reviews
pheatmap r package - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Generated:

Article Title: aristaless-like homeobox-3 is wound induced and promotes a low-Wnt environment required for planarian head regeneration.
Article Snippet: .. Heatmaps were generated using the pheatmap R package in RStudio. ..

Article Title: Exploring the dynamic characteristic of typical kombucha induced by symbiotic microbiota succession from four Chinese regions: A comprehensive analytical framework
Article Snippet: To investigate the microbial diversities and dynamic quality properties of kombucha, the successional changes with different periods from four regions were comprehensively characterized and compared.. A total of 197 indigenous yeast and bacterial strains were isolated, involving Gluconobacter, Komagataeibacter, Starmerella and Zygosaccharomyces spp.. The successional dynamics of the kombucha communities in different regions were evaluated.

Article Title: Integrated Multi-Tissue Transcriptome Profiling Characterizes the Genetic Basis and Biomarkers Affecting Reproduction in Sheep ( Ovis aries ).
Article Snippet: .. A heatmap was generated using the pheatmap R package in RStudio software (version: 4.1.2). ..

other:

Article Title: Identification of an Immune Cell Infiltration-Related Prognostic Model to Guide Immunotherapy in Endometrial Carcinoma
Article Snippet: We used the “pheatmap” R package (https://cran.rstudio.com) to draw the heatmap.

Article Title: Utilizing rat kidney gene co-expression networks to enhance safety assessment biomarker identification and human translation
Article Snippet: pheatmap R package , Kolde , https://cran.rstudio.com/.

Expressing:

Article Title: Embryogenesis and apoptosis appears as key molecular pathways involved in Varroa destructor reproduction
Article Snippet: In this study, we identified candidate genes associated with the reproductive success of Varroa destructor in Apis mellifera brood cells at a key point in time, the 4th day after host cell capping.. First-life cycle reproducing (R) and non-reproducing (NR) mites obtained by applying a semi-field rearing protocol were analyzed by RNA-Seq and qPCR.. We observed a general under-expression of genes associated with metabolism and a few over-expressed genes putatively involved in signal transduction and DNA-binding transcription factor activity in R compared to NR mites.

Article Title: CEBPB is associated with active tumor immune environment and favorable prognosis of metastatic skin cutaneous melanoma
Article Snippet: .. The expression heatmap was visualized through the pheatmap R package ( https://cran.rstudio.com/web/packages/pheatmap/ ). ..

Software:

Article Title: Integrated Multi-Tissue Transcriptome Profiling Characterizes the Genetic Basis and Biomarkers Affecting Reproduction in Sheep ( Ovis aries ).
Article Snippet: .. A heatmap was generated using the pheatmap R package in RStudio software (version: 4.1.2). ..

Article Title: Profiling of Metabolite Changes in Lettuce Leaves during Fermentation by Bacillus subtilis
Article Snippet: Multivariate statistical analyses, including principal component analysis (PCA), were conducted using Statistica software (version 7.1; StatSoft, USA). .. Additionally, hierarchical cluster analysis (HCA), visualized as a heat map, was performed in R using the Pheatmap R package (RStudio, v2023.12.1; Posit Software, PBC). ..

High Content Screening:

Article Title: Profiling of Metabolite Changes in Lettuce Leaves during Fermentation by Bacillus subtilis
Article Snippet: Multivariate statistical analyses, including principal component analysis (PCA), were conducted using Statistica software (version 7.1; StatSoft, USA). .. Additionally, hierarchical cluster analysis (HCA), visualized as a heat map, was performed in R using the Pheatmap R package (RStudio, v2023.12.1; Posit Software, PBC). ..



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